Course


Biostatistics (BI372), Fall 2017

Instructor
  • Jing Li（李婧）
  • E: jing.li@sjtu.edu.cn
  • Office: 4-221, Life Building Complex
  • Office hours: Monday 10:00 pm-12:00 pm
    • TA
  • Xi Cheng (成茜)
  • E: cathy0237@163.com
  • Office: 4-221, Life Building Complex
    		•
    Schedule
  • Lectures

    •     time:MON 14:00 - 15:40
        location: 中院 104

  • Lab

    •     time:Thur 10:00 - 11:40 (Even weeks only)
        location: 4-302 Biology Building, The computer lab of the department of Bioinformatics and Biostatistics
    Syllabus& Lectures




    Topic
    		LecturesAssignments
    Week 1
  • Introduction to Biostatistics and Data
    		• pdfChocolate paper #1
    Chocolate paper #2
    Week 2
  • Describing and Displaying Data
    		• pdf
    Week 3
  • Data Distributions and Sampling
    		• pdfAssignment #3
    Week 4
       Happy National Day& Moon Festival !
    Week 5
  • Hypothesis Testing (I)

    		•  pdf Assignment #4
    Week 6
  • Hypothesis Testing (II)

    		•  pdf   Assignment #5
    Week 7
  • Comparison of one or two groups: z-test & t-test (I)

    		•  pdf   Assignment #6
    Week 8
  • Comparison of one or two groups: z-test & t-test (II)

    		•  pdf   Assignment #7
    Week 9
  • Comparison of several groups: ANOVA

    		•  pdf Assignment #8
    Week 10
  • Two-way ANOVA

    		•  pdf Assignment #9
    Week 11
  • Simple Linear Correlation and Regression

    		•  pdf
    Week 12
  • Correlation and Regression

    		•  pdf Assignment #10
    Week 13
  • Nonparametric statistics

    		•  pdf Assignment #11
    Week 14
  • Analysis of binary/categorical outcomes:Chi-square test

    		•  pdf Assignment #12

    Week 15
  • Survival Analysis

    		•  pdf Assignment #13

    Week 16
  • Project Presentation is coming !

    		•  requirements for presentation&report

    		New!!

    Solutions for assignment 3-13


    Lab
    Topic
    		LecturesPractice files
  • Week 2: R Basic
    		• Lab Syllabus  

    pdf    

    Lab1-solution    		 R Reference card

  • Week 4: R Graph

    		• pdf

    Lab2-solution     		librarian.csv

  • Week 6: Statistics Primer with R

    		• pdf
    		BodyTemperature

  • Week 8: DescriptiveStatistics, Z&t test Using R

    		• Key points

    Z-test,  t-test     		Pre-lab

  • Week 10: Multiple sample means comparison

    		• Key-points

    OneWay ANOVA

    TwoWay ANOVA    		 Pre-lab

  • Week 12: Field trip!


  • Week 14:Correlation&Non-par&Chi-square using R

    • ppt        
    References
  • Betty R. Kirkwood, Jonathan A.C. Sterne.Essential Medical Statistics. 2nd Edition. Blackwell

  • R for Beginners, Emmanuel Paradis
  • R for Beginners (中文)
  • An Introduction to R , W. N. Venables, D. M. Smith
  • Statistics with R , Vincent Zoonekynd
    • Projects Coming soon !
    Field trip
    Others
  • Table of the Standard Normal Distribution

  • Table of the T Distribution

  • Critical Values of the F Distribution

  • Critical Values for the Wilcoxon Rank-Sum Test

    		•


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    ©2012 Jing Li