Course

BI372: Biostatistics ( Fall 2019)

Instructor

Jing Li（李婧）

E: jing.li@sjtu.edu.cn

Office: 4-221, Life Building Complex

Office hours: Wednesday 1:30 pm - 3:30 pm

Yafei Chang (常亚飞)

E: sjtuyf@sjtu.edu.cn

Office: 4-221, Life Building Complex

Schedule

Lectures

Time: Mon 10:00 - 11:40
Location: 东上院411

Lab

Time: Wed 10:00 - 11:40 (Even weeks only)
Location: 4-302 Biology Building, The computer lab of the department of Bioinformatics and Biostatistics

Syllabus& Lectures

Topic	Lectures	Assignments
Week 1
Introduction to Biostatistics	pdf	Assignment #1 Reading: Chocolate&Nobel paper
Week 2
Describing and Displaying Data (I)	pdf	Assignment #2 Reading: CPTAC paper&clinical dat
Week 3
Describing and Displaying Data (II)	pdf	No Assignment ^_^
Week 4
Data Distributions and Sampling	pdf	Assignment #3
Week 5	National day
Week 6
Hypothesis Testing (I)	pdf	Assignment #4
Week 7
Hypothesis Testing (II)	pdf	Assignment #5
Week 8
Hypothesis testing: one sample inference	pdf	Assignment #6
Week 9
Hypothesis testing: two-sample inference	pdf	Assignment #7
Week 10
Comparison of several groups: ANOVA	pdf	NO Assignment ^_^
Week 11
Two-way ANOVA	pdf (Updated on 11/25)	Assignment #8
Week 12
Nonparametric statistics for k-sample tests	pdf	Assignment #9
Week 13
Analysis of binary/categorical outcomes:Chi-square test	pdf	Assignment #10
Week 14
Simple correlation and regression	pdf	Assignment #11 Paper reading
Week 15
Survival Analysis	pdf	Assignment #12

Lab

Topic	Lectures	Practice files
Week 2: R Basic	pdf	R Reference card
Week 6: R Graph	pdf	librarian.csv
Week 8: Descriptive stastatistics and simulation in R		codes Additioanl Practice
Week 10: Z test& t test using R	Key Points	Practice PPT Codes
Week 12: Field trip!
Week 14: ANOVA, Non-parametric & Chi-square test using R		slides&codes
Week 14: Simple correlation and regression using R		slides&codes