BI217: Introductory Bioinformatics & BiostatisticsInstructor: Maoying Wu Syllabus2010LecturesBioinformaticsLecture 1: What is Bioinformatics? 03/13/2010Lecture 2: Biological Side of Bioinformatics 03/27/2010 Lecture 3: Mathematical Principles in Bioinformatics 04/09/2010 Lecture 4: Developing Your Computer Skills for Bioinformatics
Lecture 6: Analysis of Biological Sequences Lecture 7: Sequence Alignment and Phylogenetic Reinference Lecture 8: Microarray Data Analysis Lecture 9: Next-generation Sequencing Reading Discussions BiostatisticsLecture Note 1A: Introduction to R Language[Hands-on Exercises][Reference] Lecture Note 1B: R programming [day2.txt][number.txt][scores.dat] [birthweights.dat][STAT3.bed] Lecture Note 2a: Probability Distributions Lecture Note 2b: More on Probability Distributions Lecture Note 3: Parameter Estimation [Hands-on Exercises] Lecture Note 4a: Hypothesis Testing [Lecture Notes][Exercises][heights.dat][heights3.dat] Lecture Note 5: Linear Correlation and Regression Lecture Note 6: Linear Models and Generalized Linear Models (GLMs) Lecture Note 7: Multivariate Analysis Lecture Note 8: Survival Analysis Lecture Note 9: Preprocessing and Analysis of High-dimensional Data Web ResourcesNCBIPDB Bioinformatics BMC Bioinformatics Journal of Computational Biology Biostatistics Computational ResourcesThe Association of C and C++ Usershttp://www.accu.org/ Blitz++ matrix library http://www.oonumerics.org/blitz/ GSL, GNU Scientic Library http://www.gnu.org/software/gsl/ The Matrix Template Library http://www.osl.iu.edu/research/mtl/ National Institute of Standards and Technology http://math.nist.gov/ Netlib collection of mathematical software, papers, and databases http://www.netlib.org/ R Project for Statistical Computing http://www.r-project.org/ |