Dr. Chaochun Wei, Department of Bioinformatics and Biostatistics

Software

• NeSSM: Next generation Sequencing Simulator for Metagenomics

• FlexSA: a Flexible Sequence Analysis system (under construction)

• MetaBinG: an ultra-fast metagenomic sequence classification system using graphic processing units (GPUs)

• CTF: a Conditional random field based Transcript factor binding site Finding system

• MOST+: A motif finding system combing genomic sequence and heterogenous genome-wide signatures

• ALTSCAN: ALTernative Splicing SCANner

• Superstable Elements found in 10 human genomes

 

©2010 Chaochun Wei